Computing Sciences
Currently available projects
Construction, presentation and analysis of clinical e-pathways built from routinely collected patient centric data.
- School:
Computing Sciences
- Primary Supervisor:
Dr Beatriz de la Iglesia
Information
- Start date: October 2013
- Programme: PhD
- Mode of Study: Full Time
- Studentship Length: 3 years
How to Apply
- Deadline: 28 February 2013
- Apply online
Fees & Funding
- Funding Status: Competition Funded Project (EU Students Only)
Further Details - Funding Source: Funding is available from a number of different sources
- Funding Conditions:
Funding is available to EU students. If funding is awarded for this project it will cover tuition fees and stipend for UK students. EU students may be eligible for full funding, or tuition fees only, depending on the funding source.
- Fees: Fees Information (Opens in new window)
Entry Requirements
- Acceptable First Degree:
Computing or related discipline
- Minimum Entry Standard: 2:1
Project Description
We have defined [1] a methodology for extracting patient centric data from multiple heterogeneous hospital information systems (IS). The collection of data on patients with prostate cancer has been one successful example of our approach and has established proof of principle for this proposal. The study involved collecting data from (i) textural reports from the Picture Archiving Communication System (PACS); (ii) clinical coding and appointment information from the hospital Patient Administration System (PAS); (iii) details of diagnosis, treatments and history from the oncology department system (ONC) and (iv) PSA test results and histopatological reports from the biochemistry and histopathology system (LAB). Additionally, data from the cancer registry served as a quality cross-check. Such data integration is not currently the norm unless patients are part of a clinical trial. Prostate Cancer has been estimated to directly cost the NHS £45 million per year in 1997 [2]. It is the most common male cancer in the UK and there is a need for data integration because there is considerable debate about which treatment is best.
After collecting the data and generating an Operational Data Store (ODS) containing patient centric information on thousands of patients with prostate cancer, we have proposed a framework for the construction of authoritative e-pathways from such data. We have developed measures of quality of each pathway constructed so that clinical analysis can include only those records deemed of sufficient quality. We have also developed software to build, visualise and explore the e-pathways. This work, now being published, will enable further clinical and epidemiological research on prostate cancer but also the development of methods to compare and analyse pathways, improve integration and visualisation enabling clinicians to follow their patients' journeys. The database assembled is unique in the content and presentation of the information on prostate cancer pathways.
A number of challenges still remaining. First, retrieving, linking and collating patient centric data is non-trivial. We need to implement a system that will periodically collect, link and analyse new data and add it to the ODS. Second, although we can now present e-pathways for over 1,900 patients, we would like to build capability to conduct analysis such as compliance with the NICE defined prostate cancer pathway, survival of patients on different treatments or ability to match a patient's e-pathway with other similar e-pathways to look for possible outcomes. Finally, we believe that it is possible to extend all our work on building and analysing e-pathways to other diseases. Another case study to assess the generalisability of the tools developed is that of patients with stroke. Stroke is particularly suitable because the timing of events in the disease pathway is of very importance and there is great interest in constructing and analysing such data in the local NHS hospital. Stroke represents a significant economic cost to healthcare providers and society as a whole. In 2006, the direct, and indirect cost and cost of informal care of stroke in the UK to the National Health Service (NHS) was estimated to be £8.3 billion [3].
References
Bettencourt-Silva J, de la Iglesia B, Donell S, Rayward-Smith V. On creating a patient-centric database from multiple Hospital Information Systems. Methods Inf Med. 2012;51(3):210-20.
Chamberlain J, Melia J, Moss S, Brown J. The diagnosis, management, treatment and costs of prostate cancer in England and Wales. Health Technol Assess. 1997;1(3):i-vi, 1-53.
Allender S, S.P., Peto V, Rayner M, Leal J, Luengo-Fernandez R and Gray A, European cardiovascular disease statistics. European Heart Network: Brussels, 2008
Huang Z, Lu X, Duan H. On mining clinical pathway patterns from medical behaviors. Artif Intell Med. 2012 Jul 16. [Epub ahead of print] PubMed PMID
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