All Publications

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Camacho, N., Van Loo, P., Edwards, S., Kay, J., Matthews, L., Haase, K., Clark, J., Dennis, N., Thomas, S., Kremeyer, B., Zamora, J., Butler, A., Gundem, G., Merson, S., Luxton, H., Hawkins, S., Ghori, M., Marsden, L., Lambert, A., Karaszi, K., Pelvender, G., Massie, C., Kote-Jarai, Z., Raine, K., Jones, D., Howat, W., Hazell, S., Livni, N., Fisher, C., Ogden, C., Kumar, P., Thompson, A., Nicol, D., Mayer, E., Dudderidge, T., Yu, Y., Zhang, H., Shah, N., Gnanapragasam, V., Isaacs, W., Visakorpi, T., Hamdy, F., Berney, D., Verrill, C., Warren, A., Wedge, D., Lynch, A., Foster, C., Lu, Y. J., Bova, G. S., Whitaker, H., McDermott, U., Neal, D., Eeles, R., Cooper, C., Brewer, D.

(2017)

Appraising the relevance of DNA copy number loss and gain in prostate cancer using whole genome DNA sequence data,

in PLoS Genetics

13

(9)

article no. e1007001

Full Text UEA Repository

(Article)

(Published)


Pellegrini, K. L., Patil, D., Douglas, K. J., Lee, G., Wehrmeyer, K., Torlak, M., Clark, J., Cooper, C. S., Moreno, C. S., Sanda, M. G.

(2017)

Detection of prostate cancer-specific transcripts in extracellular vesicles isolated from post-DRE urine,

in The Prostate

77

(9)

pp. 990-999

Full Text UEA Repository

(Article)

(Published)


Luca, B., Brewer, D. S., Edwards, D. R., Edward, S., Whitaker, H. C., Merson, S., Denis, N., Cooper, R. A., Hazell, S., Warren, A. Y., Eeles, R., Lynch, A. G., Ross-Adams, H., Lamb, A. D., Neal, D. E., Sethia, K., Mills, R. D., Ball, R. Y., Curley, H., Clark, J., Moulton, V., Cooper, C. S.

(2017)

DESNT: a poor prognosis category of human prostate cancer,

in European Urology Focus

Full Text UEA Repository

(Article)

(E-pub ahead of print)


Cooper, C. S., Clark, J., Brewer, D. S., Edwards, D. R.

(2016)

Prostate Single Nucleotide Polymorphism Provides a Crucial Clue to Cancer Aggression in Active Surveillance Patients,

in European Urology

69

(2)

pp. 229-30

Full Text

(Editorial)

(Published)


Ross-Adams, H., Lamb, A., Dunning, M., Halim, S., Lindberg, J., Massie, C., Egevad, L., Russell, R., Ramos-Montoya, A., Vowler, S., Sharma, N., Kay, J., Whitaker, H., Clark, J., Hurst, R., Gnanapragasam, V., Shah, N., Warren, A., Cooper, C., Lynch, A., Stark, R., Mills, I., Groenberg, H., Neal, D.

(2015)

Integration of copy number and transcriptomics provides risk stratification in prostate cancer: A discovery and validation cohort study,

in EBioMedicine

2

(9)

pp. 1133–1144

Full Text UEA Repository

(Article)

(Published)


Cooper, C., Eeles, R. A., Wedge, D. C., Van loo, P., Gundem, G., Alexandrov, L., Kreymer, B., Butler, A., Lynch, A., Edwards, S. E., Camacho, N., Massie, C. E., Kote-Jarai, Z., Dennis, N., Merson, S., Leongamornlert, D. A., Zamora, J., Kay, J., Luxton, H. J., Corbishley, C., Thomas, S., Nik-zainal, S., O'Meara, S., Matthews, L., Clark, J., Hurst, R., Mithen (IFR), R., Bristow (Ontario Cancer Inst. CA), R., Boutros, P. C., Fraser, M., Cooke, S., Raine, K., Jones, D., Menzies, A., Stebbings, L., Hinton, J., Teague, J., Mclaren, S., Mudie, L., Hardy, C., Anderson, E., Joseph, O., Goody, V., Robinson, B., Maddison, M., Gamble, S., Greenman, C., Berney, D., Hazell, S., Livni, N., Fisher, C., Ogden, C., Kumar, P., Thompson, A., Woodhouse, C. J., Nicol, D., Mayer, E., Dudderidge, T., Shah, N., Gnanapragasam (Cambridge), V., Voet, T., Campbell, P., Futreal, P. A., Easton, D. F., Warren, A. Y., Foster, C. S., Stratton, M. R., Whitaker, H. C., Mcdermott, U., Brewer, D., Neal, D. E.

(2015)

Analysis of the genetic phylogeny of multifocal prostate cancer identifies multiple independent clonal expansions in neoplastic and morphologically normal prostate tissue,

in Nature Genetics

47

pp. 367–372

Full Text

(Letter)

(Published)


Doll, A., Clark, J., Nelson, C.

(2015)

Biomarker and Translational Prostate Cancer Research,

in BioMed Research International

2015

article no. 309851

Full Text

(Editorial)

(Published)


Manson-Bahr, D., Ball, R., Gundem, G., Mills, R., Rochester, M., Goody, V., O'Meara, S., Flather, M., Keeling, M., Yazbek Hanna, M., Hurst, R., Curley, H., Clark, J., Brewer, D., Mcdermott, U., Cooper, C.

(2015)

Mutation detection in formalin-fixed prostate cancer biopsies taken at the time of diagnosis using next generation DNA sequencing,

in Journal of Clinical Pathology

68

pp. 212-217

Full Text UEA Repository

(Article)

(Published)


Bettencourt-Silva, J. H., Clark, J., Cooper, C. S., Mills, R., Rayward-Smith, V. J., De La Iglesia, B.

(2015)

Building Data-Driven Pathways From Routinely Collected Hospital Data: A Case Study on Prostate Cancer,

in JMIR Medical Informatics

3

(3)

article no. e26

Full Text UEA Repository

(Article)

(Published)


Merson, S., Yang, Z. H., Brewer, D., Olmos, D., Eichholz, A., McCarthy, F., Fisher, G., Kovacs, G., Berney, D. M., Foster, C. S., Møller, H., Scardino, P., Cuzick, J., Cooper, C. S., Clark, J.

(2014)

Focal amplification of the androgen receptor gene in hormone-naive human prostate cancer,

in British Journal of Cancer

110

(6)

pp. 1655-62

Full Text UEA Repository

(Article)

(Published)


Cuzick, J., Yang, Z. H., Fisher, G., Tikishvili, E., Stone, S., Lanchbury, J. S., Camacho, N., Merson, S., Brewer, D., Cooper, C. S., Clark, J., Berney, D. M., Møller, H., Scardino, P., Sangale, Z.

(2013)

Prognostic value of PTEN loss in men with conservatively managed localised prostate cancer,

in British Journal of Cancer

108

(12)

pp. 2582-9

Full Text UEA Repository

(Article)

(Published)


Rigau, M., Olivan, M., Garcia, M., Sequeiros, T., Montes, M., Colás, E., Llauradó, M., Planas, J., Torres, I. D., Morote, J., Cooper, C., Reventós, J., Clark, J., Doll, A.

(2013)

The present and future of prostate cancer urine biomarkers,

in International Journal of Molecular Sciences

14

(6)

pp. 12620-49

Full Text UEA Repository

(Article)

(Published)


Olmos, D., Brewer, D., Clark, J., Danila, D. C., Parker, C., Attard, G., Fleisher, M., Reid, A. H., Castro, E., Sandhu, S. K., Barwell, L., Oommen, N. B., Carreira, S., Drake, C. G., Jones, R., Cooper, C. S., Scher, H. I., de Bono, J. S.

(2012)

Prognostic value of blood mRNA expression signatures in castration-resistant prostate cancer: a prospective, two-stage study,

in The Lancet Oncology

13

(11)

pp. 1114-24

Full Text UEA Repository

(Article)

(Published)


Ren, G., Liu, X., Mao, X., Zhang, Y., Stankiewicz, E., Hylands, L., Song, R., Berney, D. M., Clark, J., Cooper, C., Lu, Y.

(2012)

Identification of frequent BRAF copy number gain and alterations of RAF genes in Chinese prostate cancer,

in Genes, Chromosomes & Cancer

51

(11)

pp. 1014-23

Full Text UEA Repository

(Article)

(Published)


Reid, A. H. M., Attard, G., Brewer, D., Miranda, S., Riisnaes, R., Clark, J., Hylands, L., Merson, S., Vergis, R., Jameson, C., Høyer, S., Sørenson, K. D., Borre, M., Jones, C., de Bono, J. S., Cooper, C. S.

(2012)

Novel, gross chromosomal alterations involving PTEN cooperate with allelic loss in prostate cancer,

in Modern Pathology

25

(6)

pp. 902-10

Full Text UEA Repository

(Article)

(Published)


Clark, J. J., Nasrallah, N. A., Hart, A. S., Collins, A. L., Bernstein, I. L., Phillips, P. E. M.

(2012)

Altered risk-based decision making following adolescent alcohol use results from an imbalance in reinforcement learning in rats,

in PLoS ONE

7

(5)

article no. e37357

Full Text UEA Repository

(Article)

(Published)


Reid, A. H. M., Attard, G., Ambroisine, L., Fisher, G., Kovacs, G., Brewer, D., Clark, J., Flohr, P., Edwards, S., Berney, D. M., Foster, C. S., Fletcher, A., Gerald, W. L., Møller, H., Reuter, V. E., Scardino, P. T., Cuzick, J., de Bono, J. S., Cooper, C. S.

(2010)

Molecular characterisation of ERG, ETV1 and PTEN gene loci identifies patients at low and high risk of death from prostate cancer,

in British Journal of Cancer

102

(4)

pp. 678-84

Full Text UEA Repository

(Article)

(Published)


Attard, G., de Bono, J. S., Clark, J., Cooper, C. S.

(2010)

Studies of TMPRSS2-ERG gene fusions in diagnostic trans-rectal prostate biopsies,

in Clinical Cancer Research

16

(4)

pp. 1340; author reply 1340

Full Text UEA Repository

(Article)

(Published)


Clark, J. J., Sandberg, S. G., Wanat, M. J., Gan, J. O., Horne, E. A., Hart, A. S., Akers, C. A., Parker, J. G., Willuhn, I., Martinez, V., Evans, S. B., Stella, N., Phillips, P. E. M.

(2010)

Chronic microsensors for longitudinal, subsecond dopamine detection in behaving animals,

in Nature Methods

7

(2)

pp. 126-9

Full Text UEA Repository

(Article)

(Published)


Attard, G., Rizzo, S., Ledaki, I., Clark, J., Reid, A. H. M., Thompson, A., Khoo, V., de Bono, J. S., Cooper, C. S., Hudson, D. L.

(2009)

A novel, spontaneously immortalized, human prostate cancer cell line, Bob, offers a unique model for pre-clinical prostate cancer studies,

in The Prostate

69

(14)

pp. 1507-20

Full Text UEA Repository

(Article)

(Published)


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