All Publications

Green, D., Mohorianu, I., Piec, I., Turner, J., Beadsmoore, C., Toms, A., Ball, R., Nolan, J., McNamara, I., Dalmay, T., Fraser, W. D.

(2017)

MicroRNA expression in a phosphaturic mesenchymal tumour,

in Bone Reports

7

pp. 63–69

Full Text UEA Repository

(Article)

(Published)


Bradley, D., Xu, P., Mohorianu, I., Whibley, A., Field, D., Tavares, H., Couchman, M., Copsey, L., Carpenter, R., Li, M., Li, Q., Xue, Y., Dalmay, T., Coen, E.

(2017)

Evolution of flower color pattern through selection on regulatory small RNAs,

in Science

358

(6365)

pp. 925-928

Full Text UEA Repository

(Article)

(Published)


Paicu, C., Mohorianu, I., Stocks, M., Xu, P., Coince, A., Billmeier, M., Dalmay, T., Moulton, V., Moxon, S.

(2017)

miRCat2: Accurate prediction of plant and animal microRNAs from next-generation sequencing datasets,

in Bioinformatics

33

(16)

pp. 2446–2454

Full Text UEA Repository

(Article)

(Published)


Mohorianu, I., Bretman, A., Smith, D. T., Fowler, E. K., Dalmay, T., Chapman, T.

(2017)

Comparison of alternative approaches for analysing multi-level RNA-seq data,

in PLoS ONE

12

(8)

article no. e0182694

Full Text UEA Repository

(Article)

(Published)


Beckers, M., Mohorianu, I., Stocks, M., Applegate, C., Dalmay, T., Moulton, V.

(2017)

Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA Workbench,

in RNA

23

(6)

pp. 823-835

Full Text UEA Repository

(Article)

(Published)


Özkan, S., Mohorianu, I., Xu, P., Dalmay, T., Coutts, R. H. A.

(2017)

Profile and functional analysis of small RNAs derived from Aspergillus fumigatus infected with double-stranded RNA mycoviruses,

in BMC Genomics

18

article no. 416

Full Text UEA Repository

(Article)

(Published)


Green, D., Mohorianu, I., McNamara, I., Dalmay, T., Fraser, W. D.

(2017)

miR-16 is highly expressed in Paget’s associated osteosarcoma,

in Endocrine-Related Cancer (ERC)

24

(5)

pp. L27-L31

Full Text

(Letter)

(Published)


Mohorianu, I., Stocks, M. B., Applegate, C. S., Folkes, L., Moulton, V.

(2017)

The UEA small RNA workbench: A suite of computational tools for small RNA analysis,

in MicroRNA Detection and Target Identification.

Springer

pp. 193-224

ISBN 978-1-4939-6864-0

Full Text UEA Repository

(Chapter)

(Published)


Collins, D. H., Mohorianu, I., Beckers, M., Moulton, V., Dalmay, T., Bourke, A. F. G.

(2017)

MicroRNAs Associated with Caste Determination and Differentiation in a Primitively Eusocial Insect,

in Scientific Reports

7

article no. 45674

UEA Repository

(Article)

(Published)


Omidvar, V., Mohorianu, I., Dalmay, T., Zheng, Y., Fei, Z., Pucci, A., Mazzucato, A., Večeřová, V., Sedlářova, M., Fellner, M.

(2017)

Transcriptional regulation of male-sterility in 7B-1 male-sterile tomato mutant,

in PLoS ONE

12

(2)

article no. e0170715

Full Text UEA Repository

(Article)

(Published)


Mohorianu, I., Bretman, A., Smith, D. T., Fowler, E. K., Dalmay, T., Chapman, T.

(2017)

Genomic responses to socio-sexual environment in male Drosophila melanogaster exposed to conspecific rivals,

in RNA

2017

(23)

pp. 1048-1059

Full Text UEA Repository

(Article)

(Published)


Chiumenti, M., Mohorianu, I., Roseti, V., Saldarelli, P., Dalmay, T., Minafra, A.

(2016)

High-throughput-sequencing-based identification of a grapevine fanleaf virus satellite RNA in Vitis vinifera,

in Archives of Virology

161

(5)

pp. 1401-1403

Full Text UEA Repository

(Article)

(Published)


Xu, P., Billmeier, M., Mohorianu, I., Green, D., Fraser, W., Dalmay, T.

(2015)

An improved protocol for small RNA library construction using High Definition adapters,

in Methods in Next Generation Sequencing

2

(1)

Full Text UEA Repository

(Article)

(Published)


Xu, P., Mohorianu, I., Yang, L., Zhao, H., Gao, Z., Dalmay, T.

(2014)

Small RNA Profile in Moso Bamboo Root and Leaf Obtained by High Definition Adapters,

in PLoS ONE

9

(7)

article no. e103590

Full Text UEA Repository

(Article)

(Published)


Donaszi-Ivanov, A., Mohorianu, I., Dalmay, T., Powell, P. P.

(2013)

Small RNA analysis in Sindbis virus infected human HEK293 cells,

in PLoS ONE

8

(12)

article no. e84070

Full Text UEA Repository

(Article)

(Published)


Mohorianu, I., Stocks, M. B., Wood, J., Dalmay, T., Moulton, V.

(2013)

CoLIde: A bioinformatics tool for CO-expression-based small RNA Loci Identification using high-throughput sequencing data,

in RNA Biology

10

(7)

pp. 1221-1230

Full Text UEA Repository

(Article)

(Published)


Lopez-Gomollon, S., Mohorianu, I., Szittya, G., Moulton, V., Dalmay, T.

(2012)

Diverse correlation patterns between microRNAs and their targets during tomato fruit development indicates different modes of microRNA actions,

in Planta

236

(6)

pp. 1875-1887

Full Text UEA Repository

(Article)

(Published)


Mohorianu, I., Lopez-Gomollon, S., Schwach, F., Dalmay, T., Moulton, V.

(2012)

FiRePat-Finding Regulatory Patterns between sRNAs and Genes,

in Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery

2

(3)

pp. 273-284

Full Text UEA Repository

(Article)

(Published)


Stocks, M., Moxon, S., Mapleson, D., Woolfenden, H., Mohorianu, I., Folkes, L., Schwach, F., Dalmay, T., Moulton, V.

(2012)

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets,

in Bioinformatics

28

(15)

pp. 2059-2061

Full Text UEA Repository

(Article)

(Published)


Mohorianu, I., Schwach, F., Jing, R., Lopez-Gomollon, S., Moxon, S., Szittya, G., Sorefan, K., Moulton, V., Dalmay, T.

(2011)

Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns,

in The Plant Journal

67

(2)

pp. 232-246

Full Text UEA Repository

(Article)

(Published)